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- Cyanine3 phosphoramidite 5′
Cyanine3 phosphoramidite 5′
货号 | 规格 | 价格 | 货期 |
---|---|---|---|
2771-100mg | 100 mg | – | in stock |
2771-250mg | 250 mg | 290.00$ | 10 days |
2771-1g | 1 g | 950.00$ | in stock |
2771-10g | 10 g | 6750.00$ | 21 days |
Cyanine3 is a fluorophore that is widely used in molecular biology experiments such as oligonucleotide labeling followed by oligonucleotide detection. By its spectral characteristics, Cyanine3 is an analog of Cy™3 with a fluorescence maximum at 570 nm in the yellow spectrum range.
Cyanine3 phosphoramidite 5’ is used in oligonucleotide synthesis for the production of 5’-cyanine3-labeled oligonucleotides. The reagent is compatible with various oligonucleotide synthesizers.
This phosphoramidite can be used for the synthesis of fluorescence-labeled primers and hybridization probes such as TaqMan and Molecular Beacon. Such labeled probes can be detected in multiplex real-time PCR in the TAMRA channel.
Condensation: 3 min. Use 0.02 M iodine solution at the oxidation step to avoid degradation of the cyanine dye.
Deprotection: At room temperature with 30% aqueous ammonium solution. It is recommended to use nucleic bases with labile protective groups for deprotection for not more than 2 h at less than 55°C. AMA (30% aqueous ammonium solution/40% aqueous methylamine 1:1 (v/v)) can be used for 10 min at 65°C in the presence of acetyldeoxycytidine. If deoxyguanidine with a dimethylformamidine protective group is used during synthesis, deprotect with 30% aqueous ammonium solution for 2 h at 65°C. If deoxyguanidine with an isobutyryl protective group is used during synthesis, deprotect for 24-36 h at room temperature.
Cy3 是一种荧光团,广泛用于分子生物学实验,例如寡核苷酸标记和寡核苷酸检测。根据其光谱特性,Cyanine3 是 Cy™3 的类似物,在黄色光谱范围内的荧光最大值为 570 nm。
花青 3 亚磷酰胺 5′ 用于寡核苷酸合成,以生产 5′-花青 3 标记的寡核苷酸。该试剂与各种寡核苷酸合成仪兼容。
这种亚磷酰胺可用于合成荧光标记的引物和杂交探针,例如 TaqMan 和 Molecular Beacon。可以在 TAMRA 通道中的多重实时 PCR 中检测到此类标记的探针。
冷凝:3 分钟。在氧化步骤中使用 0.02 碘溶液以避免花青染料降解。
脱保护:在室温下用 30% 的铵水溶液。建议使用带有不稳定保护基团的核酸碱基在低于 55°C 的条件下脱保护不超过 2 小时。 AMA(30% 铵水溶液/40% 甲胺水溶液 1:1 (v/v))可在乙酰脱氧胞苷存在下在 65°C 下使用 10 分钟。如果在合成过程中使用带有二甲基甲脒保护基团的脱氧胍,则在 65°C 下用 30% 铵水溶液脱保护 2 小时。如果在合成过程中使用带有异丁酰基保护基团的脱氧胍,则在室温下脱保护 24-36 小时。
Cyanine3 phosphoramidite 5’相关产品
Cyanine5.5 phosphoramidite, 5′-terminal
Amidite for the synthesis of oligonucleotides and qPCR probes bearing 5′-terminal dye Cyanine5.5. Useful dye for multiplex qPCR.
Amidite 用于合成带有 5′-末端染料 Cyanine5.5 的寡核苷酸和 qPCR 探针。 用于多重 qPCR 的有用染料。
FAM Phosphoramidite, 6-Isomer
Single isomer 6-FAM phosphoramidite for the synthesis of modified oligonucleotides.
用于合成修饰寡核苷酸的单一异构体 6-FAM 亚磷酰胺。
Cyanine5 phosphoramidite
Phosphoramidite derivative of Cyanine5 for the use in oligonucleotide synthesis.
Cyanine5 的亚磷酰胺衍生物,用于寡核苷酸合成。
General properties
Appearance: | red powder |
Molecular weight: | 841.81 |
Molecular formula: | C45H65N5BF4O3P |
Solubility: | good in acetonitrile, dichloromethane |
Quality control: | NMR 1H, 31P, HPLC-MS (80%) |
Storage conditions: | Storage: 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.
储存:收到后 12 个月,在 -20°C 避光保存。 运输:在室温下长达 3 周。 避免长时间暴露在光线下。 干燥。 |
MSDS: | Download |
Product specifications |
Spectral properties
Excitation/absorption maximum, nm: | 555 |
ε, L⋅mol−1⋅cm−1: | 150000 |
Emission maximum, nm: | 570 |
Fluorescence quantum yield: | 0.31 |
CF260: | 0.04 |
CF280: | 0.09 |
Oligo synthesis details
Diluent: | acetonitrile |
Coupling conditions: | 6 min coupling time recommended |
Deprotection conditions: | recommended 48 h at +4°C or ultramild protective groups; 24 h at rt possible
建议在 +4°C 或超温和保护基团下放置 48 小时; 24 小时在 rt 可能 |